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    RGD1562465 similar to GTPase activating protein testicular GAP1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499006, updated on 17-Aug-2024

    Summary

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    Symbol
    RGD1562465provided by RGD
    Full Name
    similar to GTPase activating protein testicular GAP1provided by RGD
    Primary source
    RGD:1562465
    See related
    AllianceGenome:RGD:1562465
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Thymus (RPKM 49.6), Testes (RPKM 36.7) and 9 other tissues See more
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    Genomic context

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    See RGD1562465 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (5787690..5794800, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (40300..66296, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (1667..10252)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene endogenous retrovirus group K member 5 Gag polyprotein-like Neighboring gene uncharacterized LOC134479511 Neighboring gene N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 2 Neighboring gene ralA binding protein 1 like 2 Neighboring gene thioredoxin-like 4A like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • T-cell activation Rho GTPase-activating protein-like
    • ralA-binding protein 1-like
    • rho GTPase-activating protein 20-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      5787690..5794800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010052428.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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