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    Mt4 metallothionein 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498911, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mt4provided by RGD
    Official Full Name
    metallothionein 4provided by RGD
    Primary source
    RGD:1565500
    See related
    EnsemblRapid:ENSRNOG00000019004 AllianceGenome:RGD:1565500
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565500
    Summary
    Predicted to enable metal ion binding activity. Predicted to be involved in several processes, including cellular response to zinc ion; detoxification of copper ion; and intracellular zinc ion homeostasis. Predicted to act upstream of or within intracellular monoatomic cation homeostasis. Predicted to be active in cytoplasm and nucleus. Orthologous to human MT4 (metallothionein 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 145.1), Thymus (RPKM 11.4) and 1 other tissue See more
    Orthologs
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    Genomic context

    See Mt4 in Genome Data Viewer
    Location:
    19p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (10869735..10871831, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (10863813..10865909, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (11339767..11341863, complement)

    Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene metallothionein 2A Neighboring gene metallothionein 3 Neighboring gene uncharacterized LOC108348893 Neighboring gene Bardet-Biedl syndrome 2 Neighboring gene 2-oxoglutarate and iron-dependent oxygenase domain containing 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to cadmium ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to zinc ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in detoxification of copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within intracellular monoatomic cation homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in intracellular zinc ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126084.1NP_001119556.1  metallothionein-4

      See identical proteins and their annotated locations for NP_001119556.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474006
      UniProtKB/TrEMBL
      A6JY75, D3ZTJ2
      Related
      ENSRNOP00000025694.3, ENSRNOT00000025694.6
      Conserved Domains (1) summary
      pfam00131
      Location:161
      Metallothio; Metallothionein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086037.1 Reference GRCr8

      Range
      10869735..10871831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)