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    Actmap actin maturation protease [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499106, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Actmapprovided by RGD
    Official Full Name
    actin maturation proteaseprovided by RGD
    Primary source
    RGD:1560854
    See related
    EnsemblRapid:ENSRNOG00000037715 AllianceGenome:RGD:1560854
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1560854
    Summary
    Predicted to enable cysteine-type aminopeptidase activity and initiator methionyl aminopeptidase activity. Predicted to be involved in protein processing. Orthologous to human ACTMAP (actin maturation protease). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 25.0), Kidney (RPKM 16.5) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Actmap in Genome Data Viewer
    Location:
    1q21
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (91618012..91627490)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (82490313..82499841)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (84008263..84017741)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene RAB4B, member RAS oncogene family Neighboring gene MIA SH3 domain containing Neighboring gene small nuclear ribonucleoprotein polypeptide A Neighboring gene inositol-trisphosphate 3-kinase C Neighboring gene coenzyme Q8B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables cysteine-type aminopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables initiator methionyl aminopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein processing ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    actin maturation protease
    Names
    UPF0692 protein C19orf54 homolog
    NP_001333237.1
    XP_038943077.1
    XP_038943078.1
    XP_038943081.1
    XP_038943084.1
    XP_038943097.1
    XP_038943107.1
    XP_038943108.1
    XP_038943112.1
    XP_038943117.1
    XP_038943119.1
    XP_038943121.1
    XP_038943127.1
    XP_063126935.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001346308.1 → NP_001333237.1  actin maturation protease

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A0G2JWN4
      Related
      ENSRNOP00000069948.2, ENSRNOT00000081121.3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      91618012..91627490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039087193.2 → XP_038943121.1  actin maturation protease isoform X5

    2. XM_039087149.2 → XP_038943077.1  actin maturation protease isoform X1

      UniProtKB/TrEMBL
      A0A0G2JWN4

    3. XM_039087153.2 → XP_038943081.1  actin maturation protease isoform X3

    4. XM_039087150.2 → XP_038943078.1  actin maturation protease isoform X2

    5. XM_039087156.1 → XP_038943084.1  actin maturation protease isoform X4

    6. XM_039087191.2 → XP_038943119.1  actin maturation protease isoform X4

    7. XM_039087184.2 → XP_038943112.1  actin maturation protease isoform X4

    8. XM_063270865.1 → XP_063126935.1  actin maturation protease isoform X5

    9. XM_039087169.2 → XP_038943097.1  actin maturation protease isoform X4

    10. XM_039087179.2 → XP_038943107.1  actin maturation protease isoform X4

    11. XM_039087189.2 → XP_038943117.1  actin maturation protease isoform X4

    12. XM_039087199.2 → XP_038943127.1  actin maturation protease isoform X5

    13. XM_039087180.2 → XP_038943108.1  actin maturation protease isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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