U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Fam241b family with sequence similarity 241 member B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 294499, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Fam241bprovided by RGD
    Official Full Name
    family with sequence similarity 241 member Bprovided by RGD
    Primary source
    RGD:1305587
    See related
    EnsemblRapid:ENSRNOG00000000551 AllianceGenome:RGD:1305587
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1305587
    Summary
    Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human FAM241B (family with sequence similarity 241 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 153.0), Liver (RPKM 149.7) and 9 other tissues See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Fam241b in Genome Data Viewer
    Location:
    20q11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (30595082..30598007, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (30052315..30055247, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (31734297..31736115, complement)

    Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 1 Neighboring gene uncharacterized LOC134483806 Neighboring gene neurogenin 3 Neighboring gene uncharacterized LOC120098925

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein FAM241B
    Names
    uncharacterized protein C10orf35 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127452.2 → NP_001120924.1  protein FAM241B

      See identical proteins and their annotated locations for NP_001120924.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
      UniProtKB/TrEMBL
      A6K426, B0BMZ1, F7EPJ6, M0R549
      Related
      ENSRNOP00000000662.4, ENSRNOT00000000662.9
      Conserved Domains (1) summary
      pfam15378
      Location:61 → 91
      DUF4605; Domain of unknown function (DUF4605)

    2. NM_001434622.1 → NP_001421551.1  protein FAM241B

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
      UniProtKB/TrEMBL
      A6K426, B0BMZ1, F7EPJ6, M0R549

    3. NM_001434623.1 → NP_001421552.1  protein FAM241B

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
      UniProtKB/TrEMBL
      A6K426, B0BMZ1, F7EPJ6, M0R549

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086038.1 Reference GRCr8

      Range
      30595082..30598007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039098607.2 → XP_038954535.1  protein FAM241B isoform X1

      Conserved Domains (1) summary
      pfam15378
      Location:61 → 91
      DUF4605; Domain of unknown function (DUF4605)

    2. XM_039098609.2 → XP_038954537.1  protein FAM241B isoform X1

      Conserved Domains (1) summary
      pfam15378
      Location:61 → 91
      DUF4605; Domain of unknown function (DUF4605)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools