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    Tmem150a transmembrane protein 150A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 245966, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem150aprovided by RGD
    Official Full Name
    transmembrane protein 150Aprovided by RGD
    Primary source
    RGD:619998
    See related
    EnsemblRapid:ENSRNOG00000061100 AllianceGenome:RGD:619998
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Tm6p1; Tmem150
    Summary
    Involved in catabolic process. Predicted to be active in plasma membrane. Orthologous to human TMEM150A (transmembrane protein 150A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Liver (RPKM 475.5), Kidney (RPKM 407.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tmem150a in Genome Data Viewer
    Location:
    4q32
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (105968526..105972822)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (104410271..104414630)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (100217986..100222131)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene surfactant protein B Neighboring gene ubiquitin specific peptidase 39 Neighboring gene similar to human chromosome 2 open reading frame 68 Neighboring gene ring finger protein 181 Neighboring gene vesicle-associated membrane protein 5 Neighboring gene uncharacterized LOC134486592 Neighboring gene vesicle-associated membrane protein 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in plasma membrane  
    located_in plasma membrane  
    located_in plasma membrane  
    located_in plasma membrane  

    General protein information

    Preferred Names
    transmembrane protein 150A
    Names
    fasting-inducible integral membrane protein TM6P1
    transmembrane protein 150

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_139107.1NP_620807.1  transmembrane protein 150A precursor

      See identical proteins and their annotated locations for NP_620807.1

      Status: PROVISIONAL

      Source sequence(s)
      AF186469
      UniProtKB/Swiss-Prot
      Q9QZE9
      UniProtKB/TrEMBL
      A0A8I6APK8, A6IAA6
      Conserved Domains (1) summary
      pfam10277
      Location:3229
      Frag1; Frag1/DRAM/Sfk1 family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      105968526..105972822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063285524.1XP_063141594.1  transmembrane protein 150A isoform X1

      UniProtKB/Swiss-Prot
      Q9QZE9
      UniProtKB/TrEMBL
      A0A8I6APK8, A6IAA6
      Related
      ENSRNOP00000110592.1, ENSRNOT00000172521.1
    2. XM_006236658.5XP_006236720.1  transmembrane protein 150A isoform X1

      See identical proteins and their annotated locations for XP_006236720.1

      UniProtKB/Swiss-Prot
      Q9QZE9
      UniProtKB/TrEMBL
      A0A8I6APK8, A6IAA6
      Conserved Domains (1) summary
      pfam10277
      Location:3229
      Frag1; Frag1/DRAM/Sfk1 family
    3. XM_063285525.1XP_063141595.1  transmembrane protein 150A isoform X3

      UniProtKB/TrEMBL
      A0A8I6APK8
      Related
      ENSRNOP00000073089.2, ENSRNOT00000079415.3
    4. XM_017592444.3XP_017447933.2  transmembrane protein 150A isoform X2

      UniProtKB/TrEMBL
      A0A8I6APK8
      Conserved Domains (1) summary
      pfam10277
      Location:62228
      Frag1; Frag1/DRAM/Sfk1 family
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