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    Rpp25l ribonuclease P/MRP subunit p25 like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298002, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Rpp25lprovided by RGD
    Official Full Name
    ribonuclease P/MRP subunit p25 likeprovided by RGD
    Primary source
    RGD:1306576
    See related
    EnsemblRapid:ENSRNOG00000064027 AllianceGenome:RGD:1306576
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1306576
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in tRNA 5'-leader removal. Predicted to be located in nucleus. Predicted to be part of ribonuclease MRP complex. Orthologous to human RPP25L (ribonuclease P/MRP subunit p25 like). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 50.3), Thymus (RPKM 47.5) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Rpp25l in Genome Data Viewer
    Location:
    5q22
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (61674299..61675844, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (56878420..56879956, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (58096037..58097577, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene energy homeostasis associated Neighboring gene ciliary neurotrophic factor receptor Neighboring gene dynactin subunit 3 Neighboring gene AT-rich interaction domain 3C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Baltz AG, et al. Mol Cell, 2012 Jun 8. PMID 22681889
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribonuclease P protein subunit p25-like protein
    Names
    ribonuclease P/MRP 25 subunit-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106648.2 → NP_001100118.1  ribonuclease P protein subunit p25-like protein

      See identical proteins and their annotated locations for NP_001100118.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158601
      UniProtKB/TrEMBL
      A0A8I5ZQ64, A6IIW5, B0BMX6
      Conserved Domains (1) summary
      pfam01918
      Location:27 → 89
      Alba

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      61674299..61675844 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006238032.4 → XP_006238094.1  ribonuclease P protein subunit p25-like protein isoform X1

      See identical proteins and their annotated locations for XP_006238094.1

      UniProtKB/TrEMBL
      A0A8I5ZQ64, A6IIW5, B0BMX6
      Conserved Domains (1) summary
      pfam01918
      Location:27 → 89
      Alba

    2. XM_006238031.4 → XP_006238093.1  ribonuclease P protein subunit p25-like protein isoform X1

      See identical proteins and their annotated locations for XP_006238093.1

      UniProtKB/TrEMBL
      A0A8I5ZQ64, A6IIW5, B0BMX6
      Related
      ENSRNOP00000105681.1, ENSRNOT00000128215.1
      Conserved Domains (1) summary
      pfam01918
      Location:27 → 89
      Alba
    Nucleotide Protein Strain
    Heading Accession and Version

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