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    Cds1 CDP-diacylglycerol synthase 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 81925, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cds1provided by RGD
    Official Full Name
    CDP-diacylglycerol synthase 1provided by RGD
    Primary source
    RGD:621185
    See related
    EnsemblRapid:ENSRNOG00000002142 AllianceGenome:RGD:621185
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables phosphatidate cytidylyltransferase activity. Predicted to be involved in glycerophospholipid biosynthetic process; lipid droplet formation; and positive regulation of fat cell differentiation. Located in endoplasmic reticulum membrane. Orthologous to human CDS1 (CDP-diacylglycerol synthase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 242.8), Brain (RPKM 143.7) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Cds1 in Genome Data Viewer
    Location:
    14p22
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (8126678..8187243, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (7820328..7882943, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (9396511..9456964, complement)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 1, pseudogene 1 Neighboring gene WD repeat and FYVE domain containing 3 Neighboring gene uncharacterized LOC134481826 Neighboring gene uncharacterized LOC108352705 Neighboring gene uncharacterized LOC134481827

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables phosphatidate cytidylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatidate cytidylyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within CDP-diacylglycerol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in CDP-diacylglycerol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in CDP-diacylglycerol biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in lipid droplet formation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipid droplet formation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in phosphatidylinositol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phosphatidylinositol biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of fat cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of fat cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    phosphatidate cytidylyltransferase 1
    Names
    CDP-DAG synthase 1
    CDP-DG synthase 1
    CDP-DG synthetase 1
    CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
    CDP-diglyceride pyrophosphorylase 1
    CDP-diglyceride synthase 1
    CDP-diglyceride synthetase 1
    CDS 1
    CTP:phosphatidate cytidylyltransferase 1
    NP_112521.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_031242.2NP_112521.2  phosphatidate cytidylyltransferase 1

      See identical proteins and their annotated locations for NP_112521.2

      Status: PROVISIONAL

      Source sequence(s)
      BC127492
      UniProtKB/Swiss-Prot
      A0JPL6, O35052, O88208
      UniProtKB/TrEMBL
      A6K5W7
      Related
      ENSRNOP00000002918.3, ENSRNOT00000002918.8
      Conserved Domains (1) summary
      cl21502
      Location:123457
      CTP_transf_1; Cytidylyltransferase family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      8126678..8187243 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)