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    Luzp4 leucine zipper protein 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 367753, updated on 9-Dec-2024

    Summary

    Official Symbol
    Luzp4provided by RGD
    Official Full Name
    leucine zipper protein 4provided by RGD
    Primary source
    RGD:1584898
    See related
    EnsemblRapid:ENSRNOG00000069107 AllianceGenome:RGD:1584898
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ott
    Summary
    Orthologous to human LUZP4 (leucine zipper protein 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 23.8), Lung (RPKM 8.4) and 1 other tissue See more
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    Genomic context

    See Luzp4 in Genome Data Viewer
    Location:
    Xq34
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (116092515..116133390)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (111280490..111321363)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (118725749..118766413)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene interleukin 13 receptor subunit alpha 2 Neighboring gene small nucleolar RNA, H/ACA box 35B Neighboring gene leucine rich repeats and calponin homology domain containing 2 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene heterogeneous nuclear ribonucleoprotein M, pseudogene 2 Neighboring gene nucleophosmin 1, pseudogene 9

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    leucine zipper protein 4
    Names
    LIM domain-containing protein A
    filaggrin
    ovary testis transcribed

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001408923.1NP_001395852.1  leucine zipper protein 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000021
      UniProtKB/TrEMBL
      A0A8I6A7S9, A0A8I6AP28
      Related
      ENSRNOP00000094968.1, ENSRNOT00000117574.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      116092515..116133390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)