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    Gtpbp10 GTP binding protein 10 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 312054, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gtpbp10provided by RGD
    Official Full Name
    GTP binding protein 10provided by RGD
    Primary source
    RGD:1305878
    See related
    EnsemblRapid:ENSRNOG00000007098 AllianceGenome:RGD:1305878
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in ribosome biogenesis. Predicted to be active in mitochondrion. Orthologous to human GTPBP10 (GTP binding protein 10). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 74.0), Muscle (RPKM 71.2) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Gtpbp10 in Genome Data Viewer
    Location:
    4q13
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (29431683..29449201)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (28476857..28494375)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (25635765..25653283)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene family with sequence similarity 237 member B Neighboring gene claudin 12 Neighboring gene uncharacterized LOC108350663 Neighboring gene PTTG1IP family member 2

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein 10
    Names
    GTP-binding protein 10 (putative)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100815.1NP_001094285.1  GTP-binding protein 10

      See identical proteins and their annotated locations for NP_001094285.1

      Status: VALIDATED

      Source sequence(s)
      AC111647, CA508019, CV103632
      UniProtKB/TrEMBL
      A0A8I6ADM1, A6K260, D4A3U1
      Related
      ENSRNOP00000009340.4, ENSRNOT00000009340.6
      Conserved Domains (1) summary
      TIGR02729
      Location:15343
      Obg_CgtA; Obg family GTPase CgtA

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      29431683..29449201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)