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    Rxfp1 relaxin family peptide receptor 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 295144, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rxfp1provided by RGD
    Official Full Name
    relaxin family peptide receptor 1provided by RGD
    Primary source
    RGD:1302973
    See related
    EnsemblRapid:ENSRNOG00000024120 AllianceGenome:RGD:1302973
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Lgr7
    Summary
    Enables G protein-coupled receptor activity. Involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. Orthologous to human RXFP1 (relaxin family peptide receptor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Uterus (RPKM 123.6), Heart (RPKM 37.6) and 1 other tissue See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rxfp1 in Genome Data Viewer
    Location:
    2q33
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (167070414..167191616, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (164772270..164893484, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (178402411..178520213, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene electron transfer flavoprotein dehydrogenase Neighboring gene similar to human chromosome 4 open reading frame 46 Neighboring gene uncharacterized LOC108350043 Neighboring gene transmembrane protein 144 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hormone binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables hormone binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within adenylate cyclase-modulating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within extracellular matrix organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hormone-mediated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in lung connective tissue development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within lung connective tissue development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in myofibroblast differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within myofibroblast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in nipple morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within nipple morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in parturition IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within parturition ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    relaxin receptor 1
    Names
    leucine-rich repeat-containing G-protein coupled receptor 7
    relaxin/insulin-like family peptide receptor 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_201417.2NP_958820.2  relaxin receptor 1 precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/Swiss-Prot
      Q6R6I6
      Related
      ENSRNOP00000081726.1, ENSRNOT00000101813.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      167070414..167191616 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006232508.5XP_006232570.1  relaxin receptor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8I5ZVM0
      Conserved Domains (5) summary
      cd00112
      Location:3368
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00116
      Location:138356
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:134157
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:427686
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam13855
      Location:158216
      LRR_8; Leucine rich repeat
    2. XM_039102022.2XP_038957950.1  relaxin receptor 1 isoform X2

      UniProtKB/TrEMBL
      A0A8I5ZVM0
      Conserved Domains (6) summary
      cd00112
      Location:3368
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      sd00033
      Location:134157
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:278337
      LRR_8; Leucine rich repeat
      cd14964
      Location:413439
      7tm_GPCRs; TM helix 1 [structural motif]
      cd21340
      Location:117287
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl28897
      Location:412698
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    3. XM_039102024.2XP_038957952.1  relaxin receptor 1 isoform X3

      UniProtKB/TrEMBL
      A6J5S4, F1M7X9
      Conserved Domains (5) summary
      sd00033
      Location:222
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:191244
      LRR_8; Leucine rich repeat
      cd14964
      Location:278304
      7tm_GPCRs; TM helix 1 [structural motif]
      cd21340
      Location:2205
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl28897
      Location:277563
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily