U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Angptl4 angiopoietin-like 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362850, updated on 9-Dec-2024

    Summary

    Official Symbol
    Angptl4provided by RGD
    Official Full Name
    angiopoietin-like 4provided by RGD
    Primary source
    RGD:735058
    See related
    EnsemblRapid:ENSRNOG00000007545 AllianceGenome:RGD:735058
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables identical protein binding activity. Involved in response to hypoxia. Predicted to be located in extracellular region. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human ANGPTL4 (angiopoietin like 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Liver (RPKM 386.1), Adrenal (RPKM 198.1) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Angptl4 in Genome Data Viewer
    Location:
    7q13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (15252450..15259971, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (14550288..14557797, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (18627814..18634043, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene RAB11B, member RAS oncogene family Neighboring gene ribosomal protein lateral stalk subunit P1 like 1 Neighboring gene uncharacterized LOC134479827 Neighboring gene KN motif and ankyrin repeat domains 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme inhibitor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in collagen-containing extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    angiopoietin-related protein 4
    Names
    HFARP
    angiopoietin-like protein 4
    hepatic fibrinogen/angiopoietin-related protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199115.2NP_954546.1  angiopoietin-related protein 4 precursor

      See identical proteins and their annotated locations for NP_954546.1

      Status: PROVISIONAL

      Source sequence(s)
      BC078944
      UniProtKB/Swiss-Prot
      Q6TMA8
      UniProtKB/TrEMBL
      A6KQI0
      Related
      ENSRNOP00000010031.3, ENSRNOT00000010031.8
      Conserved Domains (1) summary
      cd00087
      Location:182399
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      15252450..15259971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039079419.2XP_038935347.1  angiopoietin-related protein 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6TMA8
      UniProtKB/TrEMBL
      A6KQI0
      Conserved Domains (1) summary
      cd00087
      Location:182399
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    2. XM_039079418.2XP_038935346.1  angiopoietin-related protein 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6TMA8
      UniProtKB/TrEMBL
      A6KQI0
      Conserved Domains (1) summary
      cd00087
      Location:182399
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...