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    Prb3 proline-rich protein BstNI subfamily 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 245985, updated on 27-Nov-2024

    Summary

    Official Symbol
    Prb3provided by RGD
    Official Full Name
    proline-rich protein BstNI subfamily 3provided by RGD
    Primary source
    RGD:620386
    See related
    AllianceGenome:RGD:620386
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Prr21; Sgp158
    Expression
    Restricted expression toward (RPKM 3.3) See more
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    Genomic context

    See Prb3 in Genome Data Viewer
    Location:
    4q42
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (167295834..167300639)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (165564424..165569229)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (166040503..166045308)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein BstNI subfamily 1 Neighboring gene proline-rich protein MP5 Neighboring gene proline rich protein 2 Neighboring gene proline rich protein 2 like 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    basic salivary proline-rich protein 3
    Names
    proline rich 21
    proline-rich glycoprotein (sgp158)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_139184.2 → NP_631923.1  basic salivary proline-rich protein 3 precursor

      See identical proteins and their annotated locations for NP_631923.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/TrEMBL
      Q63179
      Conserved Domains (2) summary
      pfam05843
      Location:183 → 270
      Suf; Suppressor of forked protein (Suf)
      pfam15240
      Location:7 → 162
      Pro-rich; Proline-rich

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      167295834..167300639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063285526.1 → XP_063141596.1  basic salivary proline-rich protein 3 isoform X1

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