Zfp282 zinc finger protein 282 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Zfp282provided by RGD
Official Full Name: zinc finger protein 282provided by RGD
Primary source: RGD:1306278
See related: EnsemblRapid:ENSRNOG00000026981 AllianceGenome:RGD:1306278
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Znf282
Summary: Predicted to enable sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Orthologous to human ZNF282 (zinc finger protein 282). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Thymus (RPKM 69.8), Lung (RPKM 63.2) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 4q24

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (78215940..78241193)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (76884996..76910250)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (77554269..77580714)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

AI449432 (e-PCR)
- UniSTS:159498

RH127077 (e-PCR)
- UniSTS:207948

RH134446 (e-PCR)
- UniSTS:217726

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables sequence-specific double-stranded DNA binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger protein 282

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001106592.2 → NP_001100062.1 zinc finger protein 282

See identical proteins and their annotated locations for NP_001100062.1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000004

UniProtKB/TrEMBL

A6K0D4, A6K0D5, D4A4V7

Related

ENSRNOP00000030771.4, ENSRNOT00000037248.7

Conserved Domains (6) summary

smart00349
Location:198 → 260

KRAB; krueppel associated box

COG5048
Location:568 → 621

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:544 → 564

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:570 → 592

zf-C2H2; Zinc finger, C2H2 type

pfam01352
Location:198 → 237

KRAB; KRAB box

pfam13465
Location:612 → 637

zf-H2C2_2; Zinc-finger double domain