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    1700009N14Rikl RIKEN cDNA 1700009N14 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313163, updated on 27-Dec-2024

    Summary

    Official Symbol
    1700009N14Riklprovided by RGD
    Official Full Name
    RIKEN cDNA 1700009N14 gene likeprovided by RGD
    Primary source
    RGD:1306195
    See related
    EnsemblRapid:ENSRNOG00000031013 AllianceGenome:RGD:1306195
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1306195
    Summary
    Predicted to enable GTP binding activity and protein domain specific binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 345.5) See more
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    Genomic context

    See 1700009N14Rikl in Genome Data Viewer
    Location:
    5q22
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (59252092..59253468)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (54456005..54457381)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (54480783..54482159, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 8, pseudogene 13 Neighboring gene heterogeneous nuclear ribonucleoprotein A1, pseudogene 31 Neighboring gene RNA, U6 small nuclear 48 Neighboring gene uncharacterized LOC134478959

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    uncharacterized protein LOC313163

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014062.1NP_001014084.1  uncharacterized protein LOC313163

      See identical proteins and their annotated locations for NP_001014084.1

      Status: PREDICTED

      Source sequence(s)
      BC082086
      UniProtKB/TrEMBL
      A6IIQ5, F7ER02, Q66H11
      Related
      ENSRNOP00000043623.3, ENSRNOT00000050030.5
      Conserved Domains (1) summary
      PTZ00132
      Location:1216
      PTZ00132; GTP-binding nuclear protein Ran; Provisional

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      59252092..59253468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)