Prr16 proline rich 16 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Prr16provided by RGD
Full Name: proline rich 16provided by RGD
Primary source: RGD:1564528
See related: EnsemblRapid:ENSRNOG00000019744 AllianceGenome:RGD:1564528
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1564528
Summary: Predicted to be involved in positive regulation of cell size and positive regulation of translation. Orthologous to human PRR16 (proline rich 16). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Liver (RPKM 27.9), Brain (RPKM 13.4) and 7 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 18q11

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	18	NC_086036.1 (46622816..46963251)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	18	NC_051353.1 (44424348..44764796)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	18	NC_005117.4 (45946130..46151627)

Chromosome 18 - NC_086036.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D18Got41 (e-PCR)
- UniSTS:112219

RH133952 (e-PCR)
- UniSTS:217235

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in positive regulation of cell size	IBA Inferred from Biological aspect of Ancestor more info
involved_in positive regulation of cell size	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of translation	IBA Inferred from Biological aspect of Ancestor more info
involved_in positive regulation of translation	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: protein Largen

Names: proline-rich protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.