Pyurf PIGY upstream open reading frame [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Pyurfprovided by RGD
Official Full Name: PIGY upstream open reading frameprovided by RGD
Primary source: RGD:1565524
See related: AllianceGenome:RGD:1565524
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Pigy; Prey; Pyurfl1
Summary: Predicted to be involved in protein stabilization. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Orthologous to human PYURF (PIGY upstream open reading frame). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Heart (RPKM 198.6), Muscle (RPKM 161.9) and 9 other tissues See more
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 4q24

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (88832008..88835643)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (87501859..87505494)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (88584242..88587877)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein stabilization	ISO Inferred from Sequence Orthology more info
involved_in protein stabilization	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	ISO Inferred from Sequence Orthology more info
located_in endoplasmic reticulum membrane	ISS Inferred from Sequence or Structural Similarity more info
located_in mitochondrion	ISO Inferred from Sequence Orthology more info
located_in mitochondrion	ISS Inferred from Sequence or Structural Similarity more info

General protein information

Go to the top of the page Help

Preferred Names: protein preY, mitochondrial

Names: PIGY upstream reading frame; PIGY upstream reading frame-like 1; phosphatidylinositol glycan anchor biosynthesis, class Y

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001024370.2 → NP_001019541.1 protein preY, mitochondrial precursor

See identical proteins and their annotated locations for NP_001019541.1

Status: VALIDATED

Source sequence(s)

BC086361, DV720704, JAXUCZ010000004

UniProtKB/Swiss-Prot

Q5U1Z8

UniProtKB/TrEMBL

A6K133

Conserved Domains (1) summary

COG2835
Location:50 → 105

YcaR; Uncharacterized conserved protein YbaR, Trm112 family [Function unknown]