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    Nenf neudesin neurotrophic factor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 289380, updated on 9-Dec-2024

    Summary

    Official Symbol
    Nenfprovided by RGD
    Official Full Name
    neudesin neurotrophic factorprovided by RGD
    Primary source
    RGD:1303289
    See related
    EnsemblRapid:ENSRNOG00000003833 AllianceGenome:RGD:1303289
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Spuf; SCIRP10
    Summary
    Predicted to enable growth factor activity. Predicted to be involved in negative regulation of appetite. Predicted to act upstream of or within positive regulation of MAPK cascade. Located in endoplasmic reticulum and mitochondrion. Orthologous to human NENF (neudesin neurotrophic factor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 352.2), Lung (RPKM 199.8) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Nenf in Genome Data Viewer
    Location:
    13q27
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (105419113..105425911, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (102888004..102894804, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (109990294..109997092, complement)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene golgi associated RAB2 interactor family member 4 Neighboring gene activating transcription factor 3 Neighboring gene uncharacterized LOC102555043 Neighboring gene uncharacterized LOC102555129 Neighboring gene uncharacterized LOC134481545 Neighboring gene proton activated chloride channel 1 Neighboring gene protein phosphatase 2, regulatory subunit B', alpha

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables growth factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of appetite ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of appetite ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within positive regulation of MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    neudesin
    Names
    SCIRP10-related protein
    Spinal cord injury related protein 10
    neuron-derived neurotrophic factor
    secreted protein of unknown function
    spinal cord injury-related protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002851.1NP_001002851.1  neudesin precursor

      See identical proteins and their annotated locations for NP_001002851.1

      Status: PROVISIONAL

      Source sequence(s)
      AY623793
      UniProtKB/Swiss-Prot
      Q6IUR5
      UniProtKB/TrEMBL
      A6JGZ4
      Related
      ENSRNOP00000102526.1, ENSRNOT00000147204.1
      Conserved Domains (1) summary
      pfam00173
      Location:45100
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      105419113..105425911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)