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    1700012B07Rkl RIKEN cDNA 1700012B07 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287783, updated on 27-Nov-2024

    Summary

    Official Symbol
    1700012B07Rklprovided by RGD
    Official Full Name
    RIKEN cDNA 1700012B07 gene likeprovided by RGD
    Primary source
    RGD:1559578
    See related
    EnsemblRapid:ENSRNOG00000024233 AllianceGenome:RGD:1559578
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1559578
    Expression
    Restricted expression toward (RPKM 196.1) See more
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    Genomic context

    See 1700012B07Rkl in Genome Data Viewer
    Location:
    10q32.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (95271034..95304337, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (94771471..94804839, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (98091054..98124718, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100912202 Neighboring gene protein kinase cAMP-dependent type I regulatory subunit alpha Neighboring gene uncharacterized LOC134480894 Neighboring gene FAM20A, golgi associated secretory pathway pseudokinase Neighboring gene ribosomal protein L23a, pseudogene 1 Neighboring gene ATP binding cassette subfamily A member 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC287783

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134497.1NP_001127969.1  uncharacterized protein LOC287783

      See identical proteins and their annotated locations for NP_001127969.1

      Status: PREDICTED

      Source sequence(s)
      CH473948
      UniProtKB/TrEMBL
      A6HKC3, D3ZY08
      Related
      ENSRNOP00000035960.3, ENSRNOT00000037415.6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      95271034..95304337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063268764.1XP_063124834.1  uncharacterized protein LOC287783 isoform X1

    2. XM_039085654.2XP_038941582.1  uncharacterized protein LOC287783 isoform X2