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    Kiss1r KISS1 receptor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 78976, updated on 9-Dec-2024

    Summary

    Official Symbol
    Kiss1rprovided by RGD
    Official Full Name
    KISS1 receptorprovided by RGD
    Primary source
    RGD:70930
    See related
    EnsemblRapid:ENSRNOG00000011954 AllianceGenome:RGD:70930
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Gpr54
    Summary
    Enables G protein-coupled peptide receptor activity and neuropeptide binding activity. Involved in several processes, including arachidonate secretion; positive regulation of cell communication; and positive regulation of stress fiber assembly. Predicted to be located in several cellular components, including cell surface; cilium; and intracellular membrane-bounded organelle. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in central precocious puberty 1; hypogonadism; and hypogonadotropic hypogonadism 8 with or without anosmia. Orthologous to human KISS1R (KISS1 receptor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 5.8), Testes (RPKM 0.9) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    See Kiss1r in Genome Data Viewer
    Location:
    7q11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (10435766..10439424, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (9785135..9790283, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (12606210..12609868, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 18 Neighboring gene AT-rich interaction domain 3A Neighboring gene R3H domain containing 4 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled peptide receptor activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables G protein-coupled peptide receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables neuropeptide receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuropeptide receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cilium ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    kiSS-1 receptor
    Names
    G protein-coupled receptor 54
    G-protein coupled receptor OT7T175
    kiSS-
    kiSS-1R
    kisspeptins receptor
    metastin receptor
    orphan G protein-coupled receptor GPR54
    rOT7T175

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001301151.1NP_001288080.1  kiSS-1 receptor isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate, in-frame acceptor splice site at the 3' terminal exon compared to variant 1. The resulting shorter isoform (2) lacks two internal amino acids compared to isoform 1.
      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/Swiss-Prot
      Q924U1, Q9Z0T7
      Conserved Domains (2) summary
      pfam00001
      Location:59321
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:49191
      7tm_4; Olfactory receptor
    2. NM_023992.2NP_076482.2  kiSS-1 receptor isoform 1

      See identical proteins and their annotated locations for NP_076482.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/Swiss-Prot
      Q924U1, Q9Z0T7
      UniProtKB/TrEMBL
      A0A0G2JSL6, A0A1W2Q6L7, A6K8U8
      Related
      ENSRNOP00000016395.3, ENSRNOT00000016396.7
      Conserved Domains (1) summary
      cd15095
      Location:43334
      7tmA_KiSS1R; KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      10435766..10439424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)