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    Qser1 glutamine and serine rich 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 311266, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Qser1provided by RGD
    Official Full Name
    glutamine and serine rich 1provided by RGD
    Primary source
    RGD:1311804
    See related
    EnsemblRapid:ENSRNOG00000037514 AllianceGenome:RGD:1311804
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311804
    Summary
    Orthologous to human QSER1 (glutamine and serine rich 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 107.2), Muscle (RPKM 103.2) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Qser1 in Genome Data Viewer
    Location:
    3q32-q33
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (111592377..111658825, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (91137516..91202426, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (94702635..94767364, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene t-complex 11 like 1 Neighboring gene uncharacterized LOC134486132 Neighboring gene DEP domain containing 7 Neighboring gene proline rich and Gla domain 4 Neighboring gene ribosomal protein L17, pseudogene 17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    glutamine and serine-rich protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001139493.1 → NP_001132965.1  glutamine and serine-rich protein 1

      See identical proteins and their annotated locations for NP_001132965.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473949
      UniProtKB/TrEMBL
      A6HNV0, D3ZMD6
      Related
      ENSRNOP00000053652.3, ENSRNOT00000056808.5
      Conserved Domains (3) summary
      PHA02939
      Location:1339 → 1399
      PHA02939; hypothetical protein; Provisional
      pfam09786
      Location:336 → 477
      CytochromB561_N; Cytochrome B561, N terminal
      pfam13926
      Location:1490 → 1609
      DUF4211; Domain of unknown function (DUF4211)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      111592377..111658825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039104929.2 → XP_038960857.1  glutamine and serine-rich protein 1 isoform X1

      UniProtKB/TrEMBL
      D3ZMD6
      Related
      ENSRNOP00000100632.1, ENSRNOT00000156126.1
      Conserved Domains (3) summary
      PHA02939
      Location:1429 → 1489
      PHA02939; hypothetical protein; Provisional
      pfam13926
      Location:1575 → 1695
      DUF4211; Domain of unknown function (DUF4211)
      NF033849
      Location:384 → 681
      ser_rich_anae_1; serine-rich protein
    Nucleotide Protein Strain
    Heading Accession and Version

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