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    Ccer1 coiled-coil glutamate-rich protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500825, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ccer1provided by RGD
    Official Full Name
    coiled-coil glutamate-rich protein 1provided by RGD
    Primary source
    RGD:1560042
    See related
    EnsemblRapid:ENSRNOG00000004875 AllianceGenome:RGD:1560042
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human CCER1 (coiled-coil glutamate rich protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See Ccer1 in Genome Data Viewer
    Location:
    7q13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (34371735..34413638)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (32485063..32521296)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (38945637..38965940)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene epiphycan Neighboring gene small nucleolar RNA SNORA17 Neighboring gene uncharacterized LOC120093567

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing glutamate-rich protein 1
    Names
    uncharacterized protein C12orf12 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025052.1 → NP_001020223.1  coiled-coil domain-containing glutamate-rich protein 1

      See identical proteins and their annotated locations for NP_001020223.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079199
      UniProtKB/Swiss-Prot
      Q6AY45
      UniProtKB/TrEMBL
      A6IG70
      Conserved Domains (1) summary
      pfam15482
      Location:4 → 218
      CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      34371735..34413638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039079740.2 → XP_038935668.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q6AY45
      UniProtKB/TrEMBL
      A6IG70
      Related
      ENSRNOP00000006455.3, ENSRNOT00000006455.5
      Conserved Domains (1) summary
      pfam15482
      Location:4 → 218
      CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

    2. XM_039079739.2 → XP_038935667.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q6AY45
      UniProtKB/TrEMBL
      A6IG70
      Conserved Domains (1) summary
      pfam15482
      Location:4 → 218
      CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

    3. XM_063264099.1 → XP_063120169.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6AY45.1 GenPept UniProtKB/Swiss-Prot:Q6AY45

    Gene LinkOut

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