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    Iqch IQ motif containing H [ Rattus norvegicus (Norway rat) ]

    Gene ID: 300776, updated on 9-Dec-2024

    Summary

    Official Symbol
    Iqchprovided by RGD
    Official Full Name
    IQ motif containing Hprovided by RGD
    Primary source
    RGD:1310670
    See related
    EnsemblRapid:ENSRNOG00000008353 AllianceGenome:RGD:1310670
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1310670
    Summary
    Orthologous to human IQCH (IQ motif containing H). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 75.6), Kidney (RPKM 8.0) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Iqch in Genome Data Viewer
    Location:
    8q24
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (72784932..72978632, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (63889816..64083248, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (68332526..68526013, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene mitogen activated protein kinase kinase 5 Neighboring gene uncharacterized LOC134480190 Neighboring gene uncharacterized LOC102547003 Neighboring gene similar to human chromosome 15 open reading frame 61 Neighboring gene 60S ribosomal protein L37-like Neighboring gene uncharacterized LOC134480189 Neighboring gene alpha- and gamma-adaptin binding protein Neighboring gene SMAD family member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    IQ domain-containing protein H

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106830.1NP_001100300.1  IQ domain-containing protein H

      See identical proteins and their annotated locations for NP_001100300.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473975
      UniProtKB/TrEMBL
      A0A0G2K4U9, A6J5A0
      Related
      ENSRNOP00000086417.1, ENSRNOT00000108674.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      72784932..72978632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039081112.2XP_038937040.1  IQ domain-containing protein H isoform X1

      UniProtKB/TrEMBL
      A0A0G2K4U9, D4A855
    2. XM_017595563.3XP_017451052.1  IQ domain-containing protein H isoform X2

      UniProtKB/TrEMBL
      A0A0G2K4U9, A0A8I6G6Q5
      Related
      ENSRNOP00000081929.1, ENSRNOT00000108348.2
    3. XM_017595565.3XP_017451054.1  IQ domain-containing protein H isoform X4

      UniProtKB/TrEMBL
      A0A0G2K4U9, A0A8I5ZXQ6
    4. XM_017595564.3XP_017451053.1  IQ domain-containing protein H isoform X3

      UniProtKB/TrEMBL
      A0A8I5ZNU2
    5. XM_008766237.4XP_008764459.1  IQ domain-containing protein H isoform X1

      UniProtKB/TrEMBL
      A0A0G2K4U9, D4A855
      Related
      ENSRNOP00000011109.6, ENSRNOT00000011109.7
    6. XM_063265156.1XP_063121226.1  IQ domain-containing protein H isoform X6

      UniProtKB/TrEMBL
      A0A0G2K4U9
    7. XM_039081117.2XP_038937045.1  IQ domain-containing protein H isoform X9

      UniProtKB/TrEMBL
      A0A0G2K4U9
    8. XM_039081115.2XP_038937043.1  IQ domain-containing protein H isoform X8

      UniProtKB/TrEMBL
      A0A0G2K4U9
    9. XM_039081114.2XP_038937042.1  IQ domain-containing protein H isoform X7

      UniProtKB/TrEMBL
      A0A8I5ZNU2
    10. XM_017595566.3XP_017451055.1  IQ domain-containing protein H isoform X5

      UniProtKB/TrEMBL
      A0A0G2K4U9
    11. XM_017595568.3XP_017451057.1  IQ domain-containing protein H isoform X10

      UniProtKB/TrEMBL
      A0A8I5ZNU2
    12. XM_063265157.1XP_063121227.1  IQ domain-containing protein H isoform X10

      UniProtKB/TrEMBL
      A0A8I5ZNU2
    13. XM_017595569.3XP_017451058.1  IQ domain-containing protein H isoform X11

      UniProtKB/TrEMBL
      A0A8I5ZNU2

    RNA

    1. XR_010053948.1 RNA Sequence

      Related
      ENSRNOT00000100995.2
    2. XR_010053947.1 RNA Sequence