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    Tmem44 transmembrane protein 44 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 288028, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tmem44provided by RGD
    Official Full Name
    transmembrane protein 44provided by RGD
    Primary source
    RGD:1563737
    See related
    EnsemblRapid:ENSRNOG00000001726 AllianceGenome:RGD:1563737
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563737
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM44 (transmembrane protein 44). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 37.0), Brain (RPKM 35.4) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem44 in Genome Data Viewer
    Location:
    11q22
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (83685191..83725254)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (70181120..70216958)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (73737323..73774149)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 43, member A Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene uncharacterized LOC102548792 Neighboring gene uncharacterized LOC120095681 Neighboring gene uncharacterized LOC120095682

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables basic amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 44

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      83685191..83725254
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063270864.1 → XP_063126934.1  transmembrane protein 44 isoform X1

    2. XM_039088938.2 → XP_038944866.1  transmembrane protein 44 isoform X4

    3. XM_039088942.2 → XP_038944870.1  transmembrane protein 44 isoform X9

    4. XM_039088944.2 → XP_038944872.1  transmembrane protein 44 isoform X11

    5. XM_039088946.2 → XP_038944874.1  transmembrane protein 44 isoform X13

      UniProtKB/TrEMBL
      A6KTZ3

    6. XM_039088945.2 → XP_038944873.1  transmembrane protein 44 isoform X12

    7. XM_039088939.2 → XP_038944867.1  transmembrane protein 44 isoform X7

    8. XM_039088941.2 → XP_038944869.1  transmembrane protein 44 isoform X8

      UniProtKB/TrEMBL
      A6KTZ3

    9. XM_017598177.3 → XP_017453666.1  transmembrane protein 44 isoform X6

      UniProtKB/TrEMBL
      A6KTZ3

    10. XM_039088937.2 → XP_038944865.1  transmembrane protein 44 isoform X3

      UniProtKB/TrEMBL
      A6KTZ0

    11. XM_039088943.2 → XP_038944871.1  transmembrane protein 44 isoform X10

      UniProtKB/TrEMBL
      A6KTZ3

    12. XM_039088936.2 → XP_038944864.1  transmembrane protein 44 isoform X2

      UniProtKB/TrEMBL
      A6KTZ0

    13. XM_017598176.3 → XP_017453665.1  transmembrane protein 44 isoform X5

      UniProtKB/TrEMBL
      A6KTY9, D4ADT4
      Related
      ENSRNOP00000002353.7, ENSRNOT00000002353.10
    Nucleotide Protein Strain
    Heading Accession and Version

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