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    2510039O18Rikl RIKEN cDNA 2510039O18 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313699, updated on 9-Dec-2024

    Summary

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    Official Symbol
    2510039O18Riklprovided by RGD
    Official Full Name
    RIKEN cDNA 2510039O18 gene likeprovided by RGD
    Primary source
    RGD:1305350
    See related
    EnsemblRapid:ENSRNOG00000007968 AllianceGenome:RGD:1305350
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Kiaa2013; RGD1305350
    Summary
    Predicted to be located in membrane. Orthologous to human KIAA2013 (KIAA2013). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 138.9), Lung (RPKM 134.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See 2510039O18Rikl in Genome Data Viewer
    Location:
    5q36
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (163655082..163661346)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (158371925..158378195)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (164751413..164757680)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134487036 Neighboring gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 Neighboring gene natriuretic peptide B Neighboring gene natriuretic peptide A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Defining the membrane proteome of NK cells. Ghosh D, et al. J Mass Spectrom, 2010 Jan. PMID 19946888

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein KIAA2013 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135781.1 → NP_001129253.1  uncharacterized protein KIAA2013 homolog

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A0A8I6AC47, D3ZLT7
      Related
      ENSRNOP00000010558.4, ENSRNOT00000010558.6
      Conserved Domains (1) summary
      pfam10222
      Location:6 → 629
      DUF2152; Uncharacterized conserved protein (DUF2152)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      163655082..163661346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063287823.1 → XP_063143893.1  uncharacterized protein KIAA2013 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8I5ZM35
    Nucleotide Protein Strain
    Heading Accession and Version

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