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    Tmem229a transmembrane protein 229A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 685756, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem229aprovided by RGD
    Official Full Name
    transmembrane protein 229Aprovided by RGD
    Primary source
    RGD:1590212
    See related
    EnsemblRapid:ENSRNOG00000078723 AllianceGenome:RGD:1590212
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM229A (transmembrane protein 229A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 156.6), Uterus (RPKM 11.0) and 2 other tissues See more
    Orthologs
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    Genomic context

    See Tmem229a in Genome Data Viewer
    Location:
    4q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (54405822..54410802, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (53440287..53445286, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (52345605..52350624, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene sperm adhesion molecule 1 Neighboring gene hyaluronoglucosaminidase 5 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC134486743

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109480.3NP_001102950.1  transmembrane protein 229A

      See identical proteins and their annotated locations for NP_001102950.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/TrEMBL
      A6IE95, D4ACS9
      Related
      ENSRNOP00000098784.1, ENSRNOT00000149763.1
      Conserved Domains (1) summary
      pfam06541
      Location:268351
      ABC_trans_CmpB; Putative ABC-transporter type IV

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      54405822..54410802 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)