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    Mfap3 microfibril associated protein 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287299, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mfap3provided by RGD
    Official Full Name
    microfibril associated protein 3provided by RGD
    Primary source
    RGD:1359463
    See related
    EnsemblRapid:ENSRNOG00000002443 AllianceGenome:RGD:1359463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in plasma membrane. Orthologous to human MFAP3 (microfibril associated protein 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 101.1), Kidney (RPKM 92.4) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mfap3 in Genome Data Viewer
    Location:
    10q22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (42197292..42213011)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (41696788..41711490)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (42933077..42945591)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102553349 Neighboring gene uncharacterized LOC120095106 Neighboring gene glutamate ionotropic receptor AMPA type subunit 1 Neighboring gene family with sequence similarity 114, member A2 Neighboring gene uncharacterized LOC134480689 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene SAP30-like

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    microfibril-associated glycoprotein 3
    Names
    microfibrillar-associated protein 3
    neuroprotective protein 10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007609.1NP_001007610.1  microfibril-associated glycoprotein 3 precursor

      See identical proteins and their annotated locations for NP_001007610.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079064
      UniProtKB/Swiss-Prot
      Q6AYF7
      UniProtKB/TrEMBL
      A6HEP5, B3SVE7
      Related
      ENSRNOP00000003361.3, ENSRNOT00000003361.5
      Conserved Domains (2) summary
      smart00408
      Location:60122
      IGc2; Immunoglobulin C-2 Type
      cd00096
      Location:6272
      Ig; Ig strand B [structural motif]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      42197292..42213011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006246379.4XP_006246441.1  microfibril-associated glycoprotein 3 isoform X1

      See identical proteins and their annotated locations for XP_006246441.1

      UniProtKB/Swiss-Prot
      Q6AYF7
      UniProtKB/TrEMBL
      A6HEP5, B3SVE7
      Conserved Domains (2) summary
      smart00408
      Location:60122
      IGc2; Immunoglobulin C-2 Type
      cd00096
      Location:6272
      Ig; Ig strand B [structural motif]
    2. XM_039085387.2XP_038941315.1  microfibril-associated glycoprotein 3 isoform X1

      UniProtKB/Swiss-Prot
      Q6AYF7
      UniProtKB/TrEMBL
      A6HEP5, B3SVE7
      Conserved Domains (2) summary
      smart00408
      Location:60122
      IGc2; Immunoglobulin C-2 Type
      cd00096
      Location:6272
      Ig; Ig strand B [structural motif]