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    Proser3 proline and serine rich 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361541, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Proser3provided by RGD
    Official Full Name
    proline and serine rich 3provided by RGD
    Primary source
    RGD:1565712
    See related
    EnsemblRapid:ENSRNOG00000024625 AllianceGenome:RGD:1565712
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565712
    Summary
    Predicted to be located in centrosome. Orthologous to human PROSER3 (proline and serine rich 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 18.7), Adrenal (RPKM 18.0) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Proser3 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (94920802..94934126, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (85793363..85806682, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (88994552..89007808, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene similar to Gene model 1082 Neighboring gene Rho GTPase activating protein 33 Neighboring gene uncharacterized LOC120097050 Neighboring gene heat shock protein family B (small) member 6 Neighboring gene lin-37 DREAM MuvB core complex component Neighboring gene presenilin enhancer gamma secretase subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC188051

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    proline and serine-rich protein 3
    Names
    uncharacterized protein C19orf55 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127579.1 → NP_001121051.1  proline and serine-rich protein 3

      See identical proteins and their annotated locations for NP_001121051.1

      Status: PROVISIONAL

      Source sequence(s)
      BC166499
      UniProtKB/TrEMBL
      B2GV25, F7ELW7
      Related
      ENSRNOP00000032379.6, ENSRNOT00000032363.6
      Conserved Domains (2) summary
      PHA03247
      Location:219 → 514
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:588 → 632
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      94920802..94934126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063266459.1 → XP_063122529.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    2. XM_006228774.5 → XP_006228836.1  proline and serine-rich protein 3 isoform X1

      See identical proteins and their annotated locations for XP_006228836.1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7
      Conserved Domains (2) summary
      PHA03247
      Location:219 → 514
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:588 → 632
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    3. XM_063266466.1 → XP_063122536.1  proline and serine-rich protein 3 isoform X3

      UniProtKB/TrEMBL
      F7ELW7

    4. XM_008759168.4 → XP_008757390.2  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7
      Related
      ENSRNOP00000108765.1, ENSRNOT00000144036.1
      Conserved Domains (2) summary
      PHA03247
      Location:218 → 513
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:587 → 631
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    5. XM_063266474.1 → XP_063122544.1  proline and serine-rich protein 3 isoform X4

      UniProtKB/TrEMBL
      F7ELW7

    6. XM_063266464.1 → XP_063122534.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    7. XM_063266446.1 → XP_063122516.1  proline and serine-rich protein 3 isoform X1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7

    8. XM_063266471.1 → XP_063122541.1  proline and serine-rich protein 3 isoform X4

      UniProtKB/TrEMBL
      F7ELW7

    9. XM_063266457.1 → XP_063122527.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    10. XM_063266455.1 → XP_063122525.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    11. XM_039081900.2 → XP_038937828.1  proline and serine-rich protein 3 isoform X1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7
      Conserved Domains (2) summary
      PHA03247
      Location:219 → 514
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:588 → 632
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    12. XM_063266456.1 → XP_063122526.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    13. XM_006228772.3 → XP_006228834.1  proline and serine-rich protein 3 isoform X1

      See identical proteins and their annotated locations for XP_006228834.1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7
      Conserved Domains (2) summary
      PHA03247
      Location:219 → 514
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:588 → 632
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    14. XM_063266438.1 → XP_063122508.1  proline and serine-rich protein 3 isoform X1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7

    15. XM_063266453.1 → XP_063122523.1  proline and serine-rich protein 3 isoform X2

      UniProtKB/TrEMBL
      F7ELW7

    16. XM_039081899.2 → XP_038937827.1  proline and serine-rich protein 3 isoform X1

      UniProtKB/TrEMBL
      B2GV25, F7ELW7
      Conserved Domains (2) summary
      PHA03247
      Location:219 → 514
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:588 → 632
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

    17. XM_039081906.2 → XP_038937834.1  proline and serine-rich protein 3 isoform X5

      UniProtKB/TrEMBL
      F7ELW7
      Conserved Domains (2) summary
      PHA03247
      Location:147 → 510
      PHA03247; large tegument protein UL36; Provisional
      cd12957
      Location:517 → 561
      SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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