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    Tmem169 transmembrane protein 169 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 690294, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem169provided by RGD
    Official Full Name
    transmembrane protein 169provided by RGD
    Primary source
    RGD:1582820
    See related
    AllianceGenome:RGD:1582820
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human TMEM169 (transmembrane protein 169). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 50.2), Kidney (RPKM 21.9) and 1 other tissue See more
    Orthologs
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    Genomic context

    See Tmem169 in Genome Data Viewer
    Location:
    9q33
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (81375854..81399970)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (73926553..73950679)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (79630592..79654686)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene peroxisomal trans-2-enoyl-CoA reductase Neighboring gene X-ray repair cross complementing 5 Neighboring gene uncharacterized LOC102555358 Neighboring gene membrane associated ring-CH-type finger 4

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109574.2NP_001103044.1  transmembrane protein 169

      See identical proteins and their annotated locations for NP_001103044.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      A6KFI2, D4ACP3
      Conserved Domains (1) summary
      pfam15052
      Location:147276
      TMEM169; TMEM169 protein family
    2. NM_001432542.1NP_001419471.1  transmembrane protein 169

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      A6KFI2, D4ACP3
    3. NM_001432543.1NP_001419472.1  transmembrane protein 169

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      A6KFI2, D4ACP3
    4. NM_001432544.1NP_001419473.1  transmembrane protein 169

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      A6KFI2, D4ACP3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      81375854..81399970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039084223.2XP_038940151.1  transmembrane protein 169 isoform X1

      Conserved Domains (1) summary
      pfam15052
      Location:147276
      TMEM169; TMEM169 protein family