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    Map4k2 mitogen activated protein kinase kinase kinase kinase 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 293694, updated on 9-Dec-2024

    Summary

    Official Symbol
    Map4k2provided by RGD
    Official Full Name
    mitogen activated protein kinase kinase kinase kinase 2provided by RGD
    Primary source
    RGD:1308199
    See related
    EnsemblRapid:ENSRNOG00000021061 AllianceGenome:RGD:1308199
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable ATP binding activity; MAP kinase kinase kinase kinase activity; and mitogen-activated protein kinase kinase kinase binding activity. Predicted to be involved in several processes, including positive regulation of MAPK cascade; protein phosphorylation; and vesicle targeting. Predicted to be active in cytoplasm. Orthologous to human MAP4K2 (mitogen-activated protein kinase kinase kinase kinase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 158.7), Lung (RPKM 156.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Map4k2 in Genome Data Viewer
    Location:
    1q43
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (213074360..213090042)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (203645098..203660782)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (221710622..221726274)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene CDC42 binding protein kinase gamma Neighboring gene uncharacterized LOC134483959 Neighboring gene menin 1 Neighboring gene uncharacterized LOC134483960 Neighboring gene U7 small nuclear RNA Neighboring gene splicing factor 1 Neighboring gene glycogen phosphorylase, muscle associated Neighboring gene uncharacterized LOC120097407

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables 3-phosphoinositide-dependent protein kinase activity  
    enables AMP-activated protein kinase activity  
    enables ATP binding  
    enables DNA-dependent protein kinase activity  
    enables MAP kinase kinase kinase kinase activity  
    enables Rho-dependent protein serine/threonine kinase activity  
    enables eukaryotic translation initiation factor 2alpha kinase activity  
    enables histone H2AS1 kinase activity  
    enables histone H2AS121 kinase activity  
    enables histone H2AT120 kinase activity  
    enables histone H2AXS139 kinase activity  
    enables histone H2BS14 kinase activity  
    enables histone H2BS36 kinase activity  
    enables histone H3S10 kinase activity  
    enables histone H3S28 kinase activity  
    enables histone H3S57 kinase activity  
    enables histone H3T11 kinase activity  
    enables histone H3T3 kinase activity  
    enables histone H3T45 kinase activity  
    enables histone H3T6 kinase activity  
    enables histone H4S1 kinase activity  
    enables mitogen-activated protein kinase kinase kinase binding  
    enables protein serine/threonine kinase activity  
    enables ribosomal protein S6 kinase activity  
    Process Evidence Code Pubs
    involved_in MAPK cascade  
    involved_in chromatin remodeling  
    involved_in intracellular signal transduction  
    involved_in intracellular signal transduction  
    involved_in positive regulation of JNK cascade  
    involved_in positive regulation of JUN kinase activity  
    involved_in protein phosphorylation  
    involved_in vesicle targeting  
    Component Evidence Code Pubs
    is_active_in cytoplasm  

    General protein information

    Preferred Names
    mitogen-activated protein kinase kinase kinase kinase 2
    NP_001402759.1
    NP_001402760.1
    XP_038964431.1
    XP_038964433.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001415830.1NP_001402759.1  mitogen-activated protein kinase kinase kinase kinase 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6HZG5, A6HZG6
      Related
      ENSRNOP00000102460.1, ENSRNOT00000159644.1
    2. NM_001415831.1NP_001402760.1  mitogen-activated protein kinase kinase kinase kinase 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6HZG6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      213074360..213090042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039108505.2XP_038964433.1  mitogen-activated protein kinase kinase kinase kinase 2 isoform X2

      Conserved Domains (2) summary
      cd06613
      Location:16272
      STKc_MAP4K3_like; Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases
      cl02434
      Location:489573
      CNH; CNH domain
    2. XM_039108503.2XP_038964431.1  mitogen-activated protein kinase kinase kinase kinase 2 isoform X1

      UniProtKB/TrEMBL
      A6HZG6, D3ZXB1
      Related
      ENSRNOP00000059958.2, ENSRNOT00000064798.5
      Conserved Domains (2) summary
      smart00036
      Location:424736
      CNH; Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2
      cl21453
      Location:40207
      PKc_like; Protein Kinases, catalytic domain

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