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    Ahnak2 AHNAK nucleoprotein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 314478, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ahnak2provided by RGD
    Official Full Name
    AHNAK nucleoprotein 2provided by RGD
    Primary source
    RGD:1309696
    See related
    AllianceGenome:RGD:1309696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309696
    Summary
    Predicted to be located in several cellular components, including cytoplasmic vesicle membrane; cytosol; and myofibril. Orthologous to human AHNAK2 (AHNAK nucleoprotein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Uterus (RPKM 113.4), Lung (RPKM 89.0) and 8 other tissues See more
    Orthologs
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    Genomic context

    See Ahnak2 in Genome Data Viewer
    Location:
    6q32
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (137648867..137697580, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (131830668..131876311, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (137335273..137380219, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 170B Neighboring gene uncharacterized LOC134479263 Neighboring gene phospholipase D family, member 4 Neighboring gene clathrin binding box of aftiphilin containing 1 Neighboring gene cell division cycle associated 4

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      137648867..137697580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039113411.2XP_038969339.1  protein AHNAK2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AAE1
      Conserved Domains (2) summary
      COG2911
      Location:49705863
      TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
      cd00992
      Location:112191
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. XM_063262711.1XP_063118781.1  protein AHNAK2 isoform X4

    3. XM_063262710.1XP_063118780.1  protein AHNAK2 isoform X3

      UniProtKB/TrEMBL
      A0A8I6AAE1
    4. XM_039113413.2XP_038969341.1  protein AHNAK2 isoform X2

      UniProtKB/TrEMBL
      A0A8I6AAE1
      Conserved Domains (2) summary
      COG2911
      Location:48705763
      TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
      cd00992
      Location:1291
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    5. XM_039113412.2XP_038969340.1  protein AHNAK2 isoform X2

      UniProtKB/TrEMBL
      A0A8I6AAE1
      Conserved Domains (2) summary
      COG2911
      Location:48705763
      TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
      cd00992
      Location:1291
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...