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    Mucl3 mucin like 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 406199, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mucl3provided by RGD
    Official Full Name
    mucin like 3provided by RGD
    Primary source
    RGD:1303125
    See related
    EnsemblRapid:ENSRNOG00000042287 AllianceGenome:RGD:1303125
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Dpcr1
    Summary
    Predicted to be located in cytoplasm and plasma membrane. Orthologous to human MUCL3 (mucin like 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Mucl3 in Genome Data Viewer
    Location:
    20p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (3105360..3113278)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (3100652..3108569)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (3611965..3619884)

    Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene valyl-tRNA synthetase 2, mitochondrial Neighboring gene surfactant associated 2 Neighboring gene CB741658 gene Neighboring gene uncharacterized LOC134483854 Neighboring gene uncharacterized LOC120098824

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    mucin-like protein 3
    Names
    diffuse panbronchiolitis critical region 1
    diffuse panbronchiolitis critical region protein 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003965.1NP_001003965.1  mucin-like protein 3 precursor

      See identical proteins and their annotated locations for NP_001003965.1

      Status: VALIDATED

      Source sequence(s)
      BX883047
      UniProtKB/Swiss-Prot
      Q6MG22
      UniProtKB/TrEMBL
      A0A8L2QTR5, A6KTA7
      Related
      ENSRNOP00000100924.1, ENSRNOT00000068159.5
      Conserved Domains (1) summary
      COG5253
      Location:76293
      MSS4; Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086038.1 Reference GRCr8

      Range
      3105360..3113278
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)