U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Poteg POTE ankyrin domain family, member G [ Rattus norvegicus (Norway rat) ]

    Gene ID: 364620, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Potegprovided by RGD
    Official Full Name
    POTE ankyrin domain family, member Gprovided by RGD
    Primary source
    RGD:1359470
    See related
    AllianceGenome:RGD:1359470
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    GonSJTU1
    Summary
    Orthologous to human POTEG (POTE ankyrin domain family member G). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 204.4) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Poteg in Genome Data Viewer
    Location:
    16q12.3
    Exon count:
    68
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (71191509..71373328, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (64488632..64670418, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (68738813..68832907, complement)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108353106 Neighboring gene sperm motility kinase Neighboring gene cholinergic receptor nicotinic alpha 6 subunit Neighboring gene cholinergic receptor nicotinic beta 3 subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    POTE ankyrin domain family member A
    Names
    POTE ankyrin domain family member H
    ankyrin repeat domain-containing protein 26-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014238.3 → NP_001014260.2  POTE ankyrin domain family member A isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000016
      Conserved Domains (3) summary
      PHA03095
      Location:132 → 304
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:77 → 203
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:116 → 144
      ANK; ANK repeat [structural motif]

    2. NM_001401510.1 → NP_001388439.1  POTE ankyrin domain family member A isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000016
      UniProtKB/TrEMBL
      A0A8I6AA98

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      71191509..71373328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063275612.1 → XP_063131682.1  POTE ankyrin domain family member A isoform X14

    2. XM_063275599.1 → XP_063131669.1  POTE ankyrin domain family member A isoform X2

    3. XM_063275616.1 → XP_063131686.1  POTE ankyrin domain family member A isoform X18

    4. XM_063275615.1 → XP_063131685.1  POTE ankyrin domain family member A isoform X17

    5. XM_063275608.1 → XP_063131678.1  POTE ankyrin domain family member A isoform X10

    6. XM_063275607.1 → XP_063131677.1  POTE ankyrin domain family member A isoform X9

    7. XM_063275600.1 → XP_063131670.1  POTE ankyrin domain family member A isoform X3

    8. XM_063275611.1 → XP_063131681.1  POTE ankyrin domain family member A isoform X13

    9. XM_063275614.1 → XP_063131684.1  POTE ankyrin domain family member A isoform X16

    10. XM_063275609.1 → XP_063131679.1  POTE ankyrin domain family member A isoform X11

    11. XM_063275598.1 → XP_063131668.1  POTE ankyrin domain family member A isoform X1

    12. XM_063275605.1 → XP_063131675.1  POTE ankyrin domain family member A isoform X8

    13. XM_063275601.1 → XP_063131671.1  POTE ankyrin domain family member A isoform X4

    14. XM_063275613.1 → XP_063131683.1  POTE ankyrin domain family member A isoform X15

    15. XM_063275610.1 → XP_063131680.1  POTE ankyrin domain family member A isoform X12

    16. XM_063275604.1 → XP_063131674.1  POTE ankyrin domain family member A isoform X7

    17. XM_063275602.1 → XP_063131672.1  POTE ankyrin domain family member A isoform X5

    18. XM_063275603.1 → XP_063131673.1  POTE ankyrin domain family member A isoform X6

    19. XM_063275619.1 → XP_063131689.1  POTE ankyrin domain family member A isoform X21

    20. XM_063275618.1 → XP_063131688.1  POTE ankyrin domain family member A isoform X20

    21. XM_063275617.1 → XP_063131687.1  POTE ankyrin domain family member A isoform X19

    22. XM_017600199.3 → XP_017455688.1  POTE ankyrin domain family member A isoform X22

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools