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    Wipf2 WAS/WASL interacting protein family, member 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360620, updated on 9-Dec-2024

    Summary

    Official Symbol
    Wipf2provided by RGD
    Official Full Name
    WAS/WASL interacting protein family, member 2provided by RGD
    Primary source
    RGD:1561080
    See related
    EnsemblRapid:ENSRNOG00000027849 AllianceGenome:RGD:1561080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561080
    Summary
    Predicted to enable actin binding activity. Orthologous to human WIPF2 (WAS/WASL interacting protein family member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 36.6), Adrenal (RPKM 30.3) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Wipf2 in Genome Data Viewer
    Location:
    10q31
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (84317305..84357862)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (83821067..83861634)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (86776367..86813046)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene CASC3 exon junction complex subunit Neighboring gene Rap guanine nucleotide exchange factor like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene cell division cycle 6 Neighboring gene uncharacterized LOC134480867 Neighboring gene retinoic acid receptor, alpha

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    WAS/WASL-interacting protein family member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191825.1NP_001178754.1  WAS/WASL-interacting protein family member 2

      See identical proteins and their annotated locations for NP_001178754.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3
      Conserved Domains (1) summary
      pfam02205
      Location:3660
      WH2; WH2 motif

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      84317305..84357862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063269425.1XP_063125495.1  WAS/WASL-interacting protein family member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3
      Related
      ENSRNOP00000032337.4, ENSRNOT00000029021.7
    2. XM_063269428.1XP_063125498.1  WAS/WASL-interacting protein family member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3
    3. XM_006247353.5XP_006247415.1  WAS/WASL-interacting protein family member 2 isoform X1

      See identical proteins and their annotated locations for XP_006247415.1

      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3
      Conserved Domains (1) summary
      pfam02205
      Location:3660
      WH2; WH2 motif
    4. XM_063269427.1XP_063125497.1  WAS/WASL-interacting protein family member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3
    5. XM_063269426.1XP_063125496.1  WAS/WASL-interacting protein family member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8I6AJB8, D3ZUD3