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    Slc16a2 solute carrier family 16 member 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 259248, updated on 9-Dec-2024

    Summary

    Official Symbol
    Slc16a2provided by RGD
    Official Full Name
    solute carrier family 16 member 2provided by RGD
    Primary source
    RGD:628608
    See related
    EnsemblRapid:ENSRNOG00000002832 AllianceGenome:RGD:628608
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables thyroid hormone transmembrane transporter activity. Involved in hormone transport. Located in apical plasma membrane. Human ortholog(s) of this gene implicated in Allan-Herndon-Dudley syndrome and intellectual disability. Orthologous to human SLC16A2 (solute carrier family 16 member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 94.0), Liver (RPKM 82.1) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Slc16a2 in Genome Data Viewer
    Location:
    Xq22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (72791096..72914299, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (68725365..68848572, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (74578600..74706068, complement)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene RBPJ interacting and tubulin associated 1 like 1 Neighboring gene ribosomal protein L38 like 3 Neighboring gene ring finger protein, LIM domain interacting

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables thyroid hormone transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thyroid hormone transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables thyroid hormone transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables thyroid hormone transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    monocarboxylate transporter 8
    Names
    MCT 8
    solute carrier family 16 (monocarboxylic acid transporters), member 2
    solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
    solute carrier family 16, member 2 (thyroid hormone transporter)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_147216.2NP_671749.2  monocarboxylate transporter 8

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000021
      UniProtKB/Swiss-Prot
      G3V9C2, Q8K1P8
      UniProtKB/TrEMBL
      A6IV07
      Related
      ENSRNOP00000098884.1, ENSRNOT00000151894.1
      Conserved Domains (2) summary
      cd17420
      Location:106504
      MFS_MCT8_10; Monocarboxylate transporters 8 and 10, and similar proteins of the Major Facilitator Superfamily of transporters
      cl40703
      Location:65104
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      72791096..72914299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)