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    LOC100362109 hypothetical protein LOC100362109 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100362109, updated on 9-Dec-2024

    Summary

    Symbol
    LOC100362109provided by RGD
    Full Name
    hypothetical protein LOC100362109provided by RGD
    Primary source
    RGD:2318773
    See related
    EnsemblRapid:ENSRNOG00000030150 AllianceGenome:RGD:2318773
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human C22orf46P (chromosome 22 open reading frame 46, pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 107.3) See more
    Orthologs
    NEW
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    Genomic context

    See LOC100362109 in Genome Data Viewer
    Location:
    7q34
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (115458986..115466378)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (113578871..113586264)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (123295519..123304163)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit a-like Neighboring gene small nuclear ribonucleoprotein 13 Neighboring gene meiotic double-stranded break formation protein 1 Neighboring gene uncharacterized LOC134479947 Neighboring gene coiled-coil domain containing 134

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC100362109
    Names
    uncharacterized protein C22orf46 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001409219.1NP_001396148.1  uncharacterized protein LOC100362109

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      F1LZD2
      Related
      ENSRNOP00000046655.2, ENSRNOT00000048614.4

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      115458986..115466378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)