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    Fam117a family with sequence similarity 117, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 497983, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam117aprovided by RGD
    Official Full Name
    family with sequence similarity 117, member Aprovided by RGD
    Primary source
    RGD:1561062
    See related
    EnsemblRapid:ENSRNOG00000004417 AllianceGenome:RGD:1561062
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561062
    Summary
    Orthologous to human FAM117A (family with sequence similarity 117 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 217.1), Thymus (RPKM 139.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Fam117a in Genome Data Viewer
    Location:
    10q26
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (80778229..80822119)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (80281411..80325345)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (83154800..83198679)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102546598 Neighboring gene uncharacterized LOC102546674 Neighboring gene solute carrier family 35, member B1 Neighboring gene uncharacterized LOC120095178

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109039.2NP_001102509.2  protein FAM117A

      Status: VALIDATED

      Source sequence(s)
      CB584411, CB696283, JACYVV010000288, JAXUCZ010000010
      UniProtKB/TrEMBL
      A0A0G2QC58, A6HI97
      Related
      ENSRNOP00000005939.8, ENSRNOT00000005939.7
      Conserved Domains (1) summary
      pfam15388
      Location:86397
      FAM117; Protein Family FAM117

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      80778229..80822119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)