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    Fam124a family with sequence similarity 124 member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691938, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam124aprovided by RGD
    Official Full Name
    family with sequence similarity 124 member Aprovided by RGD
    Primary source
    RGD:1593344
    See related
    EnsemblRapid:ENSRNOG00000009802 AllianceGenome:RGD:1593344
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human FAM124A (family with sequence similarity 124 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 26.6), Brain (RPKM 24.2) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Fam124a in Genome Data Viewer
    Location:
    15p12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (40975789..41031069)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (36799836..36855062)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (45711994..45780395)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120097007 Neighboring gene guanylate cyclase 1 soluble subunit beta 2 Neighboring gene similar to human chromosome 13 open reading frame 42 Neighboring gene uncharacterized LOC134482129 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene serpin family E member 3 Neighboring gene ribosomal protein L38, pseudogene 7 Neighboring gene integrator complex subunit 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    family with sequence similarity 124 member A; protein FAM124A
    Names
    family with sequence similarity 124A
    rCG52099-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001433101.1NP_001420030.1  family with sequence similarity 124 member A

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      UniProtKB/TrEMBL
      A0A0G2JV50, F1M0D2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      40975789..41031069
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001080220.8XP_001080220.3  protein FAM124A isoform X1

      Related
      ENSRNOP00000069350.2, ENSRNOT00000083381.3
      Conserved Domains (1) summary
      pfam15067
      Location:45276
      FAM124; FAM124 family
    2. XM_063274874.1XP_063130944.1  protein FAM124A isoform X2