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    LOC102548331 uncharacterized LOC102548331 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102548331, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102548331provided by RGD
    Full Name
    uncharacterized LOC102548331provided by RGD
    Primary source
    RGD:7703088
    See related
    EnsemblRapid:ENSRNOG00000086602 AllianceGenome:RGD:7703088
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Muscle (RPKM 55.4), Thymus (RPKM 15.1) and 1 other tissue See more
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    Genomic context

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    See LOC102548331 in Genome Data Viewer
    Location:
    10q31
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (83089532..83096263, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (82593150..82599885, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (85541991..85548716, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 23 Neighboring gene uncharacterized LOC134480864 Neighboring gene SRC kinase signaling inhibitor 1 Neighboring gene uncharacterized LOC134480715 Neighboring gene elongin BC and polycomb repressive complex 2 associated protein Neighboring gene uncharacterized LOC120095289 Neighboring gene MLLT6, PHD finger containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      83089532..83096263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_005490756.2 RNA Sequence

    2. XR_357868.4 RNA Sequence

      Related
      ENSRNOT00000134285.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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