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    Vom1r50 vomeronasal 1 receptor 50 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494267, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vom1r50provided by RGD
    Official Full Name
    vomeronasal 1 receptor 50provided by RGD
    Primary source
    RGD:1359168
    See related
    EnsemblRapid:ENSRNOG00000032817 AllianceGenome:RGD:1359168
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1rg11
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vom1r50 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (81583682..81587933, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (72511511..72515762, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (52400683..52401660, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 47 Neighboring gene vomeronasal 1 receptor 49 Neighboring gene ribosomal protein L36A like 2 Neighboring gene vomeronasal 1 receptor pseudogene 54 Neighboring gene zinc finger protein 551

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal 1 receptor 50
    Names
    vomernasal 1 receptor Vom1r50
    vomeronasal 1 receptor, G11
    vomeronasal V1r-type receptor V1rg11
    vomeronasal type-1 receptor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008918.2NP_001008918.1  vomeronasal 1 receptor 50

      See identical proteins and their annotated locations for NP_001008918.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6KQP0
      Related
      ENSRNOP00000084585.2, ENSRNOT00000109489.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      81583682..81587933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)