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    Spaca4 sperm acrosome associated 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691120, updated on 9-Dec-2024

    Summary

    Official Symbol
    Spaca4provided by RGD
    Official Full Name
    sperm acrosome associated 4provided by RGD
    Primary source
    RGD:1587464
    See related
    EnsemblRapid:ENSRNOG00000021037 AllianceGenome:RGD:1587464
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in sperm-egg recognition. Predicted to be located in plasma membrane. Predicted to be active in membrane. Orthologous to human SPACA4 (sperm acrosome associated 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Spaca4 in Genome Data Viewer
    Location:
    1q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (105331973..105332646, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (96195514..96196187, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (101707613..101708286, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene sphingosine kinase 2 Neighboring gene ribosomal protein L18 Neighboring gene family with sequence similarity 83, member E Neighboring gene sulfotransferase family 2B member 1 Neighboring gene uncharacterized LOC134483107 Neighboring gene lemur tyrosine kinase 3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in binding of sperm to zona pellucida ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in fertilization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sperm-egg recognition IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in inner acrosomal membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in outer acrosomal membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sperm acrosome membrane-associated protein 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109623.1NP_001103093.1  sperm acrosome membrane-associated protein 4 precursor

      See identical proteins and their annotated locations for NP_001103093.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473979
      UniProtKB/TrEMBL
      A6JB85, D3ZT54
      Related
      ENSRNOP00000109097.1, ENSRNOT00000140049.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      105331973..105332646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)