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    Lrrc37a leucine rich repeat containing 37A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303556, updated on 9-Dec-2024

    Summary

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    Symbol
    Lrrc37aprovided by RGD
    Full Name
    leucine rich repeat containing 37Aprovided by RGD
    Primary source
    RGD:1559753
    See related
    AllianceGenome:RGD:1559753
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Lrrc37a3; RGD1559753
    Summary
    Orthologous to human LRRC37A3 (leucine rich repeat containing 37 member A3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 64.4) and Brain (RPKM 3.1) See more
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    Genomic context

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    See Lrrc37a in Genome Data Viewer
    Location:
    10q32.1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (88896517..88933472, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (88395837..88433519, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (91548704..91581537, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 27 Neighboring gene uncharacterized LOC134480883 Neighboring gene pleckstrin homology and RUN domain containing M1 Neighboring gene uncharacterized LOC134480884 Neighboring gene uncharacterized LOC134480885 Neighboring gene proline rich protein 2-like 1 Neighboring gene uncharacterized LOC103693460

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    leucine rich repeat containing 37A; mucin-2-like
    Names
    leucine rich repeat containing 37, member A3
    leucine-rich repeat-containing protein 37A2-like
    leucine-rich repeat-containing protein 37A3-like
    mucin-17-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      88896517..88933472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017597813.3 → XP_017453302.2  mucin-2-like isoform X2

      Conserved Domains (5) summary
      PHA03247
      Location:575 → 1155
      PHA03247; large tegument protein UL36; Provisional
      sd00033
      Location:2382 → 2405
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:2406 → 2464
      LRR_8; Leucine rich repeat
      pfam14914
      Location:3058 → 3204
      LRRC37AB_C; LRRC37A/B like protein 1 C-terminal domain
      pfam15779
      Location:1249 → 1316
      LRRC37; Leucine-rich repeat-containing protein 37 family

    2. XM_039087776.2 → XP_038943704.1  mucin-2-like isoform X1

      Conserved Domains (5) summary
      PHA03247
      Location:575 → 1155
      PHA03247; large tegument protein UL36; Provisional
      sd00033
      Location:2382 → 2405
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:2406 → 2464
      LRR_8; Leucine rich repeat
      pfam14914
      Location:3058 → 3204
      LRRC37AB_C; LRRC37A/B like protein 1 C-terminal domain
      pfam15779
      Location:1249 → 1316
      LRRC37; Leucine-rich repeat-containing protein 37 family
    Nucleotide Protein Strain
    Heading Accession and Version

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