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    LOC102553524 uncharacterized LOC102553524 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102553524, updated on 17-Aug-2024

    Summary

    Symbol
    LOC102553524provided by RGD
    Full Name
    uncharacterized LOC102553524provided by RGD
    Primary source
    RGD:7502785
    See related
    AllianceGenome:RGD:7502785
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Brain (RPKM 7.3), Kidney (RPKM 5.2) and 4 other tissues See more
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    Genomic context

    See LOC102553524 in Genome Data Viewer
    Location:
    5q33
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (117346156..117362292, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (112230510..112246625, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (116206103..116222950, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene large ribosomal subunit protein P1-like Neighboring gene uncharacterized LOC120103115 Neighboring gene nuclear factor I/A Neighboring gene uncharacterized LOC120103114 Neighboring gene uncharacterized LOC108351005

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      117346156..117362292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010066549.1 RNA Sequence

    2. XR_010066548.1 RNA Sequence

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