U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Pttg1 PTTG1 regulator of sister chromatid separation, securin [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64193, updated on 9-Dec-2024

    Summary

    Official Symbol
    Pttg1provided by RGD
    Official Full Name
    PTTG1 regulator of sister chromatid separation, securinprovided by RGD
    Primary source
    RGD:68359
    See related
    EnsemblRapid:ENSRNOG00000003802 AllianceGenome:RGD:68359
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Pttg
    Summary
    Enables heat shock protein binding activity and ribosome binding activity. Involved in negative regulation of cell population proliferation and regulation of cell growth. Predicted to be located in cytosol. Predicted to be active in axoneme and nucleus. Orthologous to several human genes including PTTG1 (PTTG1 regulator of sister chromatid separation, securin) and PTTG3P (pituitary tumor-transforming 3, pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 100.1), Spleen (RPKM 85.6) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Pttg1 in Genome Data Viewer
    Location:
    10q21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (28394940..28406410, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (27893466..27904965, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (29014332..29026088, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480670 Neighboring gene uncharacterized LOC120095073 Neighboring gene uncharacterized LOC134480673 Neighboring gene microRNA 146a Neighboring gene SLU7 homolog, splicing factor Neighboring gene C1q and TNF related 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables cysteine-type endopeptidase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables heat shock protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables molecular function activator activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ribosome binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromosome organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within chromosome segregation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in homologous chromosome segregation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within homologous chromosome segregation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within mitotic sister chromatid cohesion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of cell growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within smoothened signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in axoneme ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cilium ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    securin
    Names
    Pituitary tumor transforming
    pituitary tumor-transforming 1
    pituitary tumor-transforming gene 1 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022391.3NP_071786.1  securin

      See identical proteins and their annotated locations for NP_071786.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1
      Conserved Domains (1) summary
      pfam04856
      Location:1188
      Securin; Securin sister-chromatid separation inhibitor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      28394940..28406410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039086789.2XP_038942717.1  securin isoform X2

      UniProtKB/TrEMBL
      A0A8I6A1P6, A6HDM7
      Related
      ENSRNOP00000086678.1, ENSRNOT00000093944.2
      Conserved Domains (1) summary
      pfam04856
      Location:1173
      Securin; Securin sister-chromatid separation inhibitor
    2. XM_063269814.1XP_063125884.1  securin isoform X2

      UniProtKB/TrEMBL
      A0A8I6A1P6, A6HDM7
    3. XM_063269813.1XP_063125883.1  securin isoform X1

      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1
    4. XM_006246142.3XP_006246204.1  securin isoform X1

      See identical proteins and their annotated locations for XP_006246204.1

      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1
      Conserved Domains (1) summary
      pfam04856
      Location:1188
      Securin; Securin sister-chromatid separation inhibitor
    5. XM_006246143.5XP_006246205.1  securin isoform X1

      See identical proteins and their annotated locations for XP_006246205.1

      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1
      Conserved Domains (1) summary
      pfam04856
      Location:1188
      Securin; Securin sister-chromatid separation inhibitor
    6. XM_006246144.3XP_006246206.1  securin isoform X1

      See identical proteins and their annotated locations for XP_006246206.1

      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1
      Related
      ENSRNOP00000005070.2, ENSRNOT00000005070.7
      Conserved Domains (1) summary
      pfam04856
      Location:1188
      Securin; Securin sister-chromatid separation inhibitor
    7. XM_063269812.1XP_063125882.1  securin isoform X1

      UniProtKB/Swiss-Prot
      P97613
      UniProtKB/TrEMBL
      A6HDM7, B0BMT1