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    Tor3a torsin family 3, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 304884, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tor3aprovided by RGD
    Official Full Name
    torsin family 3, member Aprovided by RGD
    Primary source
    RGD:1310101
    See related
    EnsemblRapid:ENSRNOG00000004307 AllianceGenome:RGD:1310101
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable ATP hydrolysis activity. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum lumen and nuclear envelope. Orthologous to human TOR3A (torsin family 3 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 190.6), Spleen (RPKM 89.6) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tor3a in Genome Data Viewer
    Location:
    13q22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (71324073..71348625, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (68769893..68798738, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (74246504..74277694, complement)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene DNA cross-link repair 1B, pseudogene 1 Neighboring gene FAM20B, glycosaminoglycan xylosylkinase Neighboring gene uncharacterized LOC134481574 Neighboring gene uncharacterized LOC134481575

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC105766

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum lumen IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum lumen ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nuclear envelope IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009683.2NP_001009683.1  torsin-3A precursor

      See identical proteins and their annotated locations for NP_001009683.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000013
      UniProtKB/Swiss-Prot
      Q5M936
      Related
      ENSRNOP00000005726.3, ENSRNOT00000005726.6
      Conserved Domains (1) summary
      pfam06309
      Location:113232
      Torsin

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      71324073..71348625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)