Marchf9 membrane associated ring-CH-type finger 9 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Marchf9provided by RGD
Official Full Name: membrane associated ring-CH-type finger 9provided by RGD
Primary source: RGD:1590688
See related: EnsemblRapid:ENSRNOG00000046245 AllianceGenome:RGD:1590688
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: March9; Rnf179; March-IX
Summary: Predicted to enable zinc ion binding activity. Predicted to be involved in protein ubiquitination. Predicted to be located in Golgi stack and trans-Golgi network. Orthologous to human MARCHF9 (membrane associated ring-CH-type finger 9). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Brain (RPKM 25.8), Kidney (RPKM 23.7) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 7q22

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	7	NC_086025.1 (64764346..64767824, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	7	NC_051342.1 (62879017..62882495, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	7	NC_005106.4 (70341989..70349126, complement)

Chromosome 7 - NC_086025.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

PMC212738P3 (e-PCR)
- UniSTS:272029

RH137476 (e-PCR)
- UniSTS:219564

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein ubiquitination	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in Golgi stack	ISO Inferred from Sequence Orthology more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in trans-Golgi network	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: E3 ubiquitin-protein ligase MARCHF9

Names: E3 ubiquitin-protein ligase MARCH9; membrane-associated RING-CH protein IX; membrane-associated ring finger (C3HC4) 9; membrane-associated ring finger 9

NP_001094071.1

EC 2.3.2.27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001100601.1 → NP_001094071.1 E3 ubiquitin-protein ligase MARCHF9

See identical proteins and their annotated locations for NP_001094071.1

Status: PROVISIONAL

Source sequence(s)

AB048842

UniProtKB/TrEMBL

A6P321

Related

ENSRNOP00000067861.3, ENSRNOT00000072468.4

Conserved Domains (1) summary

smart00744
Location:109 → 155

RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins