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    Znf16l-ps1 Zinc finger protein 16 like, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102555319, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Znf16l-ps1provided by RGD
    Official Full Name
    Zinc finger protein 16 like, pseudogene 1provided by RGD
    Primary source
    RGD:7613843
    See related
    AllianceGenome:RGD:7613843
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in several processes, including cellular response to sodium dodecyl sulfate; positive regulation of kinase activity; and positive regulation of myeloid cell differentiation. Predicted to be located in nucleolus and nucleoplasm. Orthologous to human ZNF16 (zinc finger protein 16). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 47.3), Muscle (RPKM 32.7) and 9 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Znf16l-ps1 in Genome Data Viewer
    Location:
    7q34
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (110531504..110550857, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (108650889..108670242, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (117991941..118009284, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L8 Neighboring gene zinc finger protein 647 Neighboring gene similar to human chromosome 8 open reading frame 33 Neighboring gene uncharacterized LOC134479933

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of a novel zinc finger protein (HZF1) gene and its function in erythroid and megakaryocytic differentiation of K562 cells. Peng H, et al. Leukemia, 2006 Jun. PMID 16628192
    2. Zinc finger protein HZF1 promotes K562 cell proliferation by interacting with and inhibiting INCA1. Li XB, et al. Mol Med Rep, 2011 Nov-Dec. PMID 21874239

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Other Names

    • zinc finger protein 16
    • zinc finger protein 16-like

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in cellular response to sodium dodecyl sulfate ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in positive regulation of cell cycle phase transition ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in positive regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in positive regulation of erythrocyte differentiation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in positive regulation of kinase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in positive regulation of megakaryocyte differentiation ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_175277.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      110531504..110550857 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.