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    Cd200r1 CD200 receptor 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64357, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cd200r1provided by RGD
    Official Full Name
    CD200 receptor 1provided by RGD
    Primary source
    RGD:61837
    See related
    EnsemblRapid:ENSRNOG00000039048 AllianceGenome:RGD:61837
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mox2r
    Summary
    Enables protein binding activity involved in heterotypic cell-cell adhesion. Involved in several processes, including negative regulation of interleukin-6 production; negative regulation of mononuclear cell migration; and negative regulation of neuroinflammatory response. Located in cell surface. Orthologous to human CD200R1 (CD200 receptor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 86.2), Liver (RPKM 47.7) and 8 other tissues See more
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    Genomic context

    See Cd200r1 in Genome Data Viewer
    Location:
    11q21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (69392943..69427213, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (55886937..55921217, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (60848161..60882470, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene CD200 receptor 1-like Neighboring gene synaptotagmin binding, cytoplasmic RNA interacting protein, pseudogene 1 Neighboring gene ribosomal oxygenase 2, pseudogene 1 Neighboring gene GTP binding protein 8 Neighboring gene nucleolus and neural progenitor protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables protein binding involved in heterotypic cell-cell adhesion IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in external side of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cell surface glycoprotein CD200 receptor 1
    Names
    CD200 cell surface glycoprotein receptor
    OX102 antigen
    OX2 receptor
    antigen identified by monoclonal antibody MRC OX-2 receptor
    cell surface glycoprotein OX2 receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023953.2NP_076443.1  cell surface glycoprotein CD200 receptor 1 precursor

      See identical proteins and their annotated locations for NP_076443.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000011
      UniProtKB/Swiss-Prot
      Q6PS97, Q9ES58
      UniProtKB/TrEMBL
      A6IQZ7
      Related
      ENSRNOP00000002799.3, ENSRNOT00000002799.7
      Conserved Domains (3) summary
      cd00096
      Location:172178
      Ig; Ig strand C [structural motif]
      cd20985
      Location:40147
      IgV_CD200R-like; Immunoglobulin Variable domain of cell surface glycoprotein CD200 receptor and similar proteins
      cl11960
      Location:162217
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      69392943..69427213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039088612.2XP_038944540.1  cell surface glycoprotein CD200 receptor 1 isoform X3

      Conserved Domains (2) summary
      cd00096
      Location:511
      Ig; Ig strand A [structural motif]
      cl11960
      Location:5112
      Ig; Immunoglobulin domain
    2. XM_008768743.4XP_008766965.1  cell surface glycoprotein CD200 receptor 1 isoform X1

      Conserved Domains (1) summary
      cl11960
      Location:40143
      Ig; Immunoglobulin domain
    3. XM_006248347.5XP_006248409.1  cell surface glycoprotein CD200 receptor 1 isoform X4

      Conserved Domains (1) summary
      cl11960
      Location:41147
      Ig; Immunoglobulin domain
    4. XM_039088611.2XP_038944539.1  cell surface glycoprotein CD200 receptor 1 isoform X2

      Conserved Domains (3) summary
      cd00096
      Location:141147
      Ig; Ig strand C [structural motif]
      cd20985
      Location:9116
      IgV_CD200R-like; Immunoglobulin Variable domain of cell surface glycoprotein CD200 receptor and similar proteins
      cl11960
      Location:131186
      Ig; Immunoglobulin domain