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    C12h12orf76 similar to human chromosome 12 open reading frame 76 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498192, updated on 9-Dec-2024

    Summary

    Official Symbol
    C12h12orf76provided by RGD
    Official Full Name
    similar to human chromosome 12 open reading frame 76provided by RGD
    Primary source
    RGD:1560398
    See related
    EnsemblRapid:ENSRNOG00000069648 AllianceGenome:RGD:1560398
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1560398
    Summary
    Predicted to be located in membrane. Orthologous to human C12orf76 (chromosome 12 open reading frame 76). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 255.3), Kidney (RPKM 36.3) and 8 other tissues See more
    Orthologs
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    Genomic context

    See C12h12orf76 in Genome Data Viewer
    Location:
    12q16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (47452148..47456832)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (41791339..41796200)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (47551749..47556597)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930519G04 gene like Neighboring gene small nucleolar RNA SNORA26 Neighboring gene ankyrin repeat domain 13a Neighboring gene GIT ArfGAP 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane  

    General protein information

    Preferred Names
    uncharacterized protein C12orf76 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417147.1 → NP_001404076.1  uncharacterized protein C12orf76 homolog

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      Related
      ENSRNOP00000088363.2, ENSRNOT00000114141.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      47452148..47456832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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