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    Smim3 small integral membrane protein 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 286910, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smim3provided by RGD
    Official Full Name
    small integral membrane protein 3provided by RGD
    Primary source
    RGD:628864
    See related
    EnsemblRapid:ENSRNOG00000019536 AllianceGenome:RGD:628864
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Nid67
    Summary
    Predicted to enable identical protein binding activity. Predicted to be located in membrane. Orthologous to human SMIM3 (small integral membrane protein 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 132.0), Adrenal (RPKM 114.8) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Smim3 in Genome Data Viewer
    Location:
    18q12.1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (56200458..56252778, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (53930019..53982339, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (55744809..55797186, complement)

    Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene interferon-gamma-inducible GTPase 2 like 2 Neighboring gene interferon-gamma-inducible GTPase 2 like, pseudogene 1 Neighboring gene dynactin subunit 4 Neighboring gene RNA binding motif protein 22 Neighboring gene myozenin 3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane  

    General protein information

    Preferred Names
    small integral membrane protein 3
    Names
    NGF-induced differentiation clone 67 protein
    putative small membrane protein NID67
    small membrane protein NID67

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173126.3NP_775149.1  small integral membrane protein 3

      See identical proteins and their annotated locations for NP_775149.1

      Status: VALIDATED

      Source sequence(s)
      AF313411, BC070515, EV780394
      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Related
      ENSRNOP00000026426.3, ENSRNOT00000026426.7
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086036.1 Reference GRCr8

      Range
      56200458..56252778 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017600864.3XP_017456353.1  small integral membrane protein 3 isoform X6

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3
    2. XM_039096614.2XP_038952542.1  small integral membrane protein 3 isoform X6

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3
    3. XM_039096609.2XP_038952537.1  small integral membrane protein 3 isoform X1

      Conserved Domains (1) summary
      pfam17307
      Location:57116
      Smim3; Small integral membrane protein 3
    4. XM_039096613.2XP_038952541.1  small integral membrane protein 3 isoform X6

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3
    5. XM_063277153.1XP_063133223.1  small integral membrane protein 3 isoform X6

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
    6. XM_063277149.1XP_063133219.1  small integral membrane protein 3 isoform X3

    7. XM_006254769.4XP_006254831.1  small integral membrane protein 3 isoform X6

      See identical proteins and their annotated locations for XP_006254831.1

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3
    8. XM_063277151.1XP_063133221.1  small integral membrane protein 3 isoform X5

    9. XM_063277150.1XP_063133220.1  small integral membrane protein 3 isoform X4

    10. XM_063277152.1XP_063133222.1  small integral membrane protein 3 isoform X5

    11. XM_063277146.1XP_063133216.1  small integral membrane protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8I6GG85
    12. XM_063277148.1XP_063133218.1  small integral membrane protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8I6GG85
    13. XM_017600863.3XP_017456352.1  small integral membrane protein 3 isoform X6

      UniProtKB/Swiss-Prot
      Q99PE6
      UniProtKB/TrEMBL
      A6IXB1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3
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