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    LOC114774369 epidermal differentiation-specific protein-like [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114774369, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114774369
    Gene description
    epidermal differentiation-specific protein-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
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    Genomic context

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    See LOC114774369 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) Unplaced Scaffold NW_021629799.1 (56403..57788, complement)

    NW_021629799.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114774371 Neighboring gene uncharacterized LOC114774374 Neighboring gene epidermal differentiation-specific protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021629799 Unplaced Scaffold Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    epidermal differentiation-specific protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NW_021629799.1 Reference fDenClu1.1

      Range
      56403..57788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028966288.1 → XP_028822121.1  epidermal differentiation-specific protein-like

      UniProtKB/TrEMBL
      A0A8C4CCE9
      Conserved Domains (2) summary
      smart00247
      Location:8 → 83
      XTALbg; Beta/gamma crystallins
      cl03107
      Location:202 → 322
      ETX_MTX2; Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
    Nucleotide Protein
    Heading Accession and Version

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